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|    New DNA testing technology shows majorit    |
|    30 May 23 22:30:40    |
      MSGID: 1:317/3 6476cdae       PID: hpt/lnx 1.9.0-cur 2019-01-08       TID: hpt/lnx 1.9.0-cur 2019-01-08        New DNA testing technology shows majority of wild dingoes are pure, not       hybrids                Date:        May 30, 2023        Source:        University of New South Wales        Summary:        Genetic analysis shows dingo populations have significantly less        dog ancestry than previously thought.                      Facebook Twitter Pinterest LinkedIN Email              ==========================================================================       FULL STORY       ==========================================================================       Wild dingo populations have less dog lineage, with a significantly       greater proportion of pure dingoes than previously thought, according to       new research, challenging the view that pure dingoes are on the decline       due to crossbreeding.              The findings, published in Molecular Ecology, suggest previous studies       significantly overestimated the prevalence of dingo-dog mixes in the       wild and that lethal methods to control 'wild dogs' target pure dingoes.              Dingoes are genetically distinct from domestic dogs but can       interbreed. Cross- species breeding, or hybridisation, can threaten pure       species, which may become vulnerable to extinction by genetic dilution.              "For decades, there was fear that dingoes were breeding themselves into       extinction. But our findings suggest this isn't the case, and dingoes       are largely maintaining their identity, which has implications for       their management and conservation," says Dr Kylie Cairns, a conservation       biologist from UNSW Science and lead author of the study.              More pure dingoes than hybrids For the study, the research team led by       UNSW Sydney investigated the extent of dingo hybridisation in different       regions across Australia. They used a new genome-wide test to analyse       the DNA of 391 wild and captive dingoes and conducted detailed ancestry       modelling and biogeographic analysis to find wild dingoes had far less       dog ancestry than suggested by prior genetic studies.              "The old method, which relied on a relatively small number of genetic       markers and limited reference population, overestimates the amount       of dog ancestry in dingo samples -- sometimes by over 30 per cent,"       Dr Cairns says. "This meant it often identified an animal as crossbred       when it was a pure dingo or historical backcross.              "But with the new test, we can look at 195,000 points across the genome       compared with just 23 previously. So, it's a huge step up in reliability       and accuracy." In Victoria, where previous reports suggested the pure       dingo population was as small as 4 per cent, the study found 87.1 per       cent of animals tested were pure dingoes and 6.5 per cent were historical       dingo backcrosses with more than 93 per cent dingo ancestry.              Similarly, in New South Wales and Queensland, where dingo-dog       hybridisation is assumed to be pervasive, most animals were found to       be pure dingoes, and only two wild canids had less than 70 per cent       dingo ancestry.              Little evidence of hybridisation in the dingo population was also found       in the Northern Territory, South Australia, and Western Australia.              "Reliance on outdated DNA testing methods has led to the belief that       dingo-dog hybridisation is much more common in Australia than it really       is," Dr Cairns says. "Most dingoes in the wild are pure dingoes, and       the remaining animals are more dingo than anything else.              "Even in the parts of Australia where dingo-dog hybridisation is higher,       it is not the pervasive threat we've been led to believe." No animals in       the sample were 50 per cent hybrids -- meaning none were direct offspring       of a dog and a dingo in the wild. The few animals that weren't pure       dingoes were mostly historical backcrosses with a single dog ancestor       four or five generations in the past.              "While there has been some hybridisation in the past, it's not occurring       at a rapid pace today," Dr Cairns says. "Where it does happen, we can see       the offspring of the hybrids returning to their dingo roots over time."       The study also found significant regional variation in dingoes, with       four distinct wild dingo populations across mainland Australia.              "We didn't have samples from every single corner of Australia. So,       there may be even more variation in dingoes," Dr Cairns says. "There's       also a chance some dog DNA has been integrated into the dingo genome       because it's provided an evolutionary advantage, so that's something       we plan to investigate in future research using the new testing."       The findings are consistent with studies in other species demonstrating       genome- wide analysis performs more accurate identification of ancestry,       which policymakers can use to inform dingo management.              "Existing management decisions have been based on the findings from old       DNA testing technology with limited resolution," says Professor Mike       Letnic, a conservation biologist from UNSW Science and senior author of       the study. "We now have a more advanced approach using higher-density       genomic data that can be applied to dingoes to assess populations more       accurately and inform management strategies with best-available evidence."       Informing evidence-based dingo management In Australia, the term "wild       dog" is widely used in policy under the assumption there is widespread       dingo-dog hybridisation and very few remaining pure dingoes.              Under the name "wild dog," dingoes, dingo-hybrids, and feral domestic       dogs are all considered invasive species under biosecurity legislation       and subject to eradication measures like aerial baiting or trapping       across parts of the Australian mainland, including National Parks where       native animals are protected.              "It's convenient to paint all dingoes as wild dogs. But the term obscures       the reality that many pure dingoes and dingo-dominant backcrosses are       being killed," Dr Cairns says. "In fact, no other native species is       treated in quite the same way as the dingo, which is subject to lethal       control measures across all landscapes, including ones where they should       be protected." Environments without dingoes can get overrun by kangaroos,       foxes and feral cats that threaten other native animals and can change       vegetation significantly.              "Dingoes are a threat to some livestock, but they're not a pest in all       contexts. They play a crucial role as apex predators in maintaining       ecosystem function and biodiversity," Prof. Letnic says. "So, there's       a real need find a balance in management and ensure there are places in       the landscape where we maintain populations." Lethal control methods,       particularly during dingo breeding season, may inadvertently increase       the risk of hybridisation by reducing the availability of pure dingo       mates. However, more research is needed to confirm the link.              "While we don't have many hybrids running around like previously       suggested, where dingo-dog hybridisation does occur, it's in regions where       intensive lethal control is used and where there are higher numbers of       domestic pet dogs," Dr Cairns says.              The researchers suggest that the definition of "dingoes" in conservation       policy should be revised to include historical dingo backcrosses with       93 per cent or more dingo ancestry and distinguish them from "feral       domestic dogs." "Doing so will more accurately reflect the identity       of wild canids in Australia and acknowledge the value of dingoes as a       native and culturally significant species," Dr Cairns says.               * RELATED_TOPICS        o Plants_&_Animals        # Dogs # Wild_Animals # Animals # Veterinary_Medicine #        Nature # New_Species # Extinction # Mammals        * RELATED_TERMS        o Mixed-breed_dog o Canine_hybrids o Companion_dog o Gray_Wolf o        Genetics o Computational_genomics o Dog_hybrids_and_crossbreeds        o Dog_anatomy              ==========================================================================       Story Source: Materials provided by       University_of_New_South_Wales. Original written by Ben Knight. Note:       Content may be edited for style and length.                     ==========================================================================       Related Multimedia:        * Dingoes       ==========================================================================       Journal Reference:        1. Kylie M. Cairns, Mathew S. Crowther, Heidi G. Parker, Elaine A.               Ostrander, Mike Letnic. Genome‐wide variant analyses reveal        new patterns of admixture and population structure in Australian        dingoes.               Molecular Ecology, 2023; DOI: 10.1111/mec.16998       ==========================================================================              Link to news story:       https://www.sciencedaily.com/releases/2023/05/230530125449.htm              --- up 1 year, 13 weeks, 1 day, 10 hours, 50 minutes        * Origin: -=> Castle Rock BBS <=- Now Husky HPT Powered! 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